Rules of Protein-DNA Recognition: Computational and Experimental Advances

Videos from CMO Workshop 15w5167

, Rutgers University
- 09:30
DNA topology confers sequence specificity to nonspecific architectural proteins
Watch video | Download video: 201506220900-Olson.mp4 (259M)
, Utrecht University + Bijvoet Center for Biomolecular Research
- 09:58
DNA recognition and target location by the E. coli Lac Repressor
Watch video | Download video: 201506220930-Kaptein.mp4 (240M)
, Pontifical Catholic University of Chile
- 10:18
Development of new structural bioinformatics tools to advance our understanding of protein-DNA recognition
Watch video | Download video: 201506221000-Melo.mp4 (154M)
, Universidad Nacional Autónoma de México
- 12:02
Target gene specificity in the p53 family of transcription factors
Watch video | Download video: 201506221130-Viadiu.mp4 (272M)
, Boston University
- 15:25
Adaptation and Allostery
Watch video | Download video: 201506221500-Siggers.mp4 (212M)
, Max Planck Institute for Molecular Genetics
- 15:58
How do transcriptional factors "know" where to go in the genome?
Watch video | Download video: 201506221530-Meijsing.mp4 (237M)
, National Institutes of Health
- 16:24
The ETS-CRE 16-mer (CCGGAAGTGACGTCAC) on microarrays
Watch video | Download video: 201506221600-Vinson.mp4 (208M)
, Boston University
- 17:54
Nucleotide-resolution structural maps of DNA and DNA-protein complexes, in vitro and in vivo
Watch video | Download video: 201506221730-Tullius.mp4 (207M)
, Washington University in St. Louis
- 09:32
New methods for determining specificity and cooperativity
Watch video | Download video: 201506230900-Stormo.mp4 (269M)
, Cincinnati Children's Hospital
- 09:48
Approaches for Understanding Combinatoric Transcription Factor Interactions
Watch video | Download video: 201506230930-Weirauch.mp4 (159M)
, Princeton University
- 11:56
Advances in the omega-based B1H system for the comparative analysis of protein-DNA interactions
Watch video | Download video: 201506231130-Noyes.mp4 (222M)
, Princeton University
- 12:30
Explorring variation in Cys2His2 transcription factors
Watch video | Download video: 201506231200-Singh.mp4 (257M)
, Stanford
- 17:56
Developing and deploying microfluidic tools for understanding transcription factor specificities
Watch video | Download video: 201506231730-Fordyce.mp4 (223M)
, Ben-Gurion University
- 09:53
Computational inference of binding site models from high-throughput SELEX data
Watch video | Download video: 201506240930-Orenstein.mp4 (193M)
, Columbia University
- 11:11
Methods for Inferring Transcription Factor Specificity from SELEX-seq Data
Watch video | Download video: 201506241100-Rastogi.mp4 (99M)
, University of Washington
- 11:59
Watch video | Download video: 201506241140-Vierstra.mp4 (164M)
, University of Massachusetts
- 09:29
Predicting Transcription Factor Binding Sites by Combining Chromatin and Sequence Features
Watch video | Download video: 201506250900-Weng.mp4 (243M)
, University of Washington
- 09:55
Decoding TF Occupancy and Function
Watch video | Download video: 201506250930-Stamatoyannopoulos.mp4 (212M)
, Wayne State University
- 11:58
Identifying genetic variants and cellular environments affecting regulation of gene transcription
Watch video | Download video: 201506251130-Pique-Regi.mp4 (239M)
, Rutgers University
- 12:26
Genome-wide profiling of chromatin structure and accessibility in D. Melanogaster
Watch video | Download video: 201506251200-Morozov.mp4 (224M)
, University of Washington
- 12:56
Gene regulation in 3D
Watch video | Download video: 201506251230-Noble.mp4 (222M)
, University of British Columbia
- 15:28
Detection of altered TFBS in applied genome analysis
Watch video | Download video: 201506251500-Wasserman.mp4 (237M)
, Washington University
- 16:26
Why don't transcription factors get lost? Specificity and cis-regulatory interactions in large genomes
Watch video | Download video: 201506251600-Cohen.mp4 (222M)
, Lawrence Berkeley National Laboratory
- 17:26
Protein/DNA interactions in vivo: Predicting DNA occupancy and function
Watch video | Download video: 201506251700-Biggin.mp4 (223M)