Statistical and Computational Challenges In Bridging Functional Genomics, Epigenomics, Molecular QTLs, and Disease Genetics

Videos from BIRS Workshop 15w5142

, Centre national de la recherche scientifique
- 09:37
Efficient RNA isoform identification and quantification from RNA-Seq data with network flows
Watch video | Download video: 201508030914-Jacob.mp4 (66M)
, Johns Hopkins Bloomberg School of Public Health
- 10:19
Statistical analysis of RNA-seq data at different scales
Watch video | Download video: 201508030947-Leek.mp4 (101M)
, Dana-Farber
- 11:20
Overcoming bias and batch effects in RNAseq data
Watch video | Download video: 201508031043-Irizarry.mp4 (126M)
, University of California, San Francisco
- 11:59
Further Statistical Methods for the Analysis of Ribosome Profiling Data
Watch video | Download video: 201508031122-Olshen.mp4 (115M)
, Johns Hopkins University
- 12:18
Genetic and transcriptomic analysis of megakaryocytes
Watch video | Download video: 201508031200-Kammers.mp4 (53M)
, New York Genome Center & Columbia University
- 13:52
Genomic imprinting across diverse human tissues
Watch video | Download video: 201508031329-Lappalainen.mp4 (66M)
, University of Chicago
- 14:42
eQTL mapping in iPSC lines
Watch video | Download video: 201508031414-Gilad.mp4 (74M)
, Ontario Institute of Cancer Research
- 15:20
High-coverage RNA-sequencing Reveals Substantial Variation Associated with Geography, Environment and Endophenotypic Variation
Watch video | Download video: 201508031447-Awadalla.mp4 (105M)
, Princeton University
- 16:11
Heteroskedastic linear models for functional genomics
Watch video | Download video: 201508031537-Engelhardt.mp4 (92M)
, Harvard Medical School and Brigham & Women's Hospital
- 16:47
Can we rely on eQTLs to understand GWAS peaks?
Watch video | Download video: 201508031611-Sunyaev.mp4 (85M)
, Stanford University
- 09:45
Differences among individuals and between species
Watch video | Download video: 201508040909-Snyder.mp4 (91M)
, Microsoft Research
- 11:35
Linear Mixed Models for Genome and Epigenome-Wide Association Studies
Watch video | Download video: 201508041057-Listgarten.mp4 (125M)
, University of Toronto
- 12:13
Data integration, variant aggregation and combined annotation
Watch video | Download video: 201508041136-Goldenberg.mp4 (98M)
, University of Pennsylvania
- 12:46
Allele specific regulatory activity and its application to disease
Watch video | Download video: 201508041215-Brown.mp4 (96M)
, Dana-Farber Cancer Institute
- 14:28
Using Networks to Probe Biological Systems
Watch video | Download video: 201508041342-Quackenbush.mp4 (129M)
, University Health Network
- 16:05
Ensemble framework to infer large-scale causal gene regulatory networks from transcriptomic data
Watch video | Download video: 201508041543-HaibeKains.mp4 (72M)
, UCSF
- 09:50
A Two-Stage Algorithm for 3D Genome Reconstruction
Watch video | Download video: 201508050911-Segal.mp4 (121M)
, Johns Hopkins University
- 10:27
Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data
Watch video | Download video: 201508050950-Hansen.mp4 (99M)
, University of Toronto
- 11:23
Statistical methods for automated analysis of high- throughput protein localization data
Watch video | Download video: 201508051047-Moses.mp4 (94M)
, Memorial Sloan Kettering Cancer Center
- 11:59
Somatic mutations in two cancer contexts: evolutionary dynamics and gene expression impact
Watch video | Download video: 201508051124-Shah.mp4 (100M)
, Dana-Farber Harvard School of Public Health
- 12:49
Estimating sample-specific regulatory networks
Watch video | Download video: 201508051228-Kuijjer.mp4 (60M)
, Memorial Sloan Kettering Cancer Center
- 10:03
Copy Number Profile from Tumor Sequencing
Watch video | Download video: 201508060933-Seshan.mp4 (84M)
, MD Anderson Cancer Center
- 10:39
Surveys of Subtle Allelic Imbalance in Tissue
Watch video | Download video: 201508061006-Scheet.mp4 (96M)
, Massachusetts Institute of Technology
- 12:04
Convergence of dispersed regulatory mutations reveals candidate driver genes in prostate cancer
Watch video | Download video: 201508061144-Sallari.mp4 (50M)
, Stanford University
- 12:34
Whole genome sequencing of diverse human populations resolves causal regulatory variants
Watch video | Download video: 201508061204-DeGorter.mp4 (81M)
, Mines ParisTech
- 14:11
Some new methods for robust high-dimensional classification
Watch video | Download video: 201508061335-Vert.mp4 (105M)
, Massachusetts Institute of Technology
- 15:03
Joint Bayesian inference of driver variants in nine immune disorders using epigenomic annotations
Watch video | Download video: 201508061445-Li.mp4 (43M)
, Johns Hopkins University
- 15:48
The complex and cascading impact of regulatory variation
Watch video | Download video: 201508061519-Battle.mp4 (75M)
, Stanford University
- 16:09
Joint modeling of cellular and disease QTLs The majority of known GWAS associations fall in non-coding genomic regions
Watch video | Download video: 201508061549-Knowles.mp4 (52M)
, Massachusetts Institute of Technology and Broad Institute
- 16:34
Dissecting non-coding associations with human disease
Watch video | Download video: 201508061610-Kellis.mp4 (77M)
, Johns Hopkins University
- 17:05
A brief note about genetic variation
Watch video | Download video: 201508061643-Ruczinski.mp4 (61M)